Analysis of Genetic Diversity in Breeding Population of Chinese Mitten Crab Eriocheir sinensis in Changjiang River
WEI Chuangchuang1,2, LU Suwan2, ZHOU Jun2, DENG Yanfei2, ZHANG Huimin2, GU Wei1, MENG Qingguo1, LI Xuguang1,2
1. College of Marine Science and Engineering, Nanjing Normal University, Nanjing 210023, China; 2. Key Laboratory of Genetic Breeding and Cultivation for Freshwater Crustacean, Ministry of Agriculture and Rural Affairs, Freshwater Fisheries Research Institute of Jiangsu Province, Nanjing 210017, China
Abstract:To explore the genetic diversity of breeding populations of Chinese mitten crab Eriocheir sinensis from the Changjiang River system, a fragment of the mitochondrial control-region (D-loop) gene was amplified by PCR and directly sequenced in individuals collected from five localities including Changzhou, Nanjing, Suqian, Suzhou, and Zhenjiang, Jiangsu province. The results showed that a total of 192 D-loop gene sequences (790 bp) were detected, including 625 conserved sites and 164 variable sites, with higher AT content (80.2%) than the CG content (19.8%) in the gene sequences, indicating a significant bias in base composition. A total of 40 haplotypes were detected in the five breeding populations, including 12 shared haplotypes and 28 unique haplotypes, with overall haplotype diversity index (Hd) of 0.890, and the overall nucleotide diversity index (Pi) of 0.047 30, indicating a high level of genetic diversity. The genetic distance between populations was found to be ranged from 0.030 50 to 0.072 40, and the genetic differentiation coefficient between populations ranged from -0.005 65 to 0.166 76, indicating low genetic differentiation. Analysis of molecular variance revealed that 95.10% of the genetic variation was originated within populations, and 4.90% originated between populations. Haplotype network analysis showed no correspondence between haplotypes and different populations, indicating frequent gene flow between populations. In conclusion, the breeding population of Chinese mitten crab in the Changjiang River system has a high level of genetic diversity and low genetic differentiation between populations. The finding provides reference with the assessment and protection of the genetic resources of the breeding population of Chinese mitten crab.
韦创创, 鲁苏皖, 周军, 邓燕飞, 张慧敏, 顾伟, 孟庆国, 李旭光. 长江水系中华绒螯蟹繁育群体遗传多样性分析[J]. 水产科学, 2026, 45(5): 822-828.
WEI Chuangchuang, LU Suwan, ZHOU Jun, DENG Yanfei, ZHANG Huimin, GU Wei, MENG Qingguo, LI Xuguang. Analysis of Genetic Diversity in Breeding Population of Chinese Mitten Crab Eriocheir sinensis in Changjiang River. Fisheries Science, 2026, 45(5): 822-828.
[1] 蒋苏,邢秀梅,许伟鹤,等.不同品种中华绒螯蟹的生长指标、形态特征和遗传多样性的比较分析[J/OL].海洋渔业. (2023-12-05)[2025-08-01].https://link.cnki.net/doi/10.13233/j.cnki.mar.fish.20231204.001. [2] 邓燕飞,徐宇,许志强,等.中华绒螯蟹遗传育种进展[J].水产养殖,2017,38(6):39-42. [3] 农业农村部渔业渔政管理局,全国水产技术推广总站,中国水产学会.2024中国渔业统计年鉴[M].北京:中国农业出版社,2024:59. [4] 周刚,周军.我国河蟹产业现状及可持续发展对策[J].中国水产,2011(2):11-12. [5] 邢秀梅.不同品种中华绒螯蟹的生长指标、营养成分和遗传多样性的比较分析[D].南京:南京师范大学,2022. [6] 王世会.中国沿海绒螯蟹种质资源挖掘、养殖性能和品质评价[D].上海:上海海洋大学,2020. [7] 葛家春,许志强,李晓晖,等.利用线粒体COⅠ序列分析4水系中华绒螯蟹群体遗传学特征[J].中国水产科学,2011,18(1):16-22. [8] 许志强,葛家春,李跃华,等.四水系中华绒螯蟹天然群体遗传特征的微卫星标记分析[J].南京大学学报(自然科学版),2011,47(1):82-90. [9] ZHANG C, LI Q Q, WU X G, et al. Genetic diversity and genetic structure of farmed and wild Chinese mitten crab (Eriocheir sinensis) populations from three major basins by mitochondrial DNA COⅠ and Cyt b gene sequences[J].Mitochondrial DNA Part A,2018,29(7):1081-1089. [10] 李晓晖,许志强,潘建林,等.中华绒螯蟹人工选育群体的遗传多样性[J].中国水产科学,2010,17(2):236-242. [11] 彭欣悦.长江口中华绒螯蟹亲蟹遗传多样性及其增殖放流效果评估的研究[D].上海:上海海洋大学,2016. [12] 鲁苏皖,徐宇,李佳佳,等.基于线粒体D-loop序列的江苏克氏原螯虾养殖群体遗传多样性分析[J].江苏农业科学,2024,52(10):192-196. [13] 董新培,武小斌,万海付,等.河北3个日本沼虾野生群体线粒体DNA D-Loop基因序列变异及种群遗传结构分析[J].水产学报,2017,41(2):182-188. [14] 赵优,张雅杰,程颖,等.水生动物群体遗传多样性研究技术概述与展望[J].中国口岸科学技术,2025,7(4):18-23. [15] 赵燕,陈红菊,孔维祎,等.日本沼虾多态性标记筛选及群体遗传结构分析[J].水产科学,2020,39(5):639-648. [16] 苏雨,张成,李清清,等.中华绒螯蟹长江、黄河和辽河水系野生和养殖群体的遗传多样性[J].中国水产科学,2019,26(3):436-444. [17] LIU R C, LIN X R, HU J H, et al. Analysis of molecular advantages in offspring of large-sized Chinese mitten crabs based on reproductive lineage[J].Aquaculture,2025,596:741870. [18] 彭欣悦,赵峰,张涛,等.基于线粒体COⅠ序列比较长江口中华绒螯蟹放流与野生群体的遗传多样性[J].海洋渔业,2016,38(3):254-261. [19] WRIGHT S. Evolution and the genetics of population variability within and among natural population[M].Chicago:University of Chicago Press, 1978: 121-124. [20] 胡玉婷,凌俊,江河,等.中华绒螯蟹4个养殖群体遗传多样性与遗传结构分析[J].江苏农业科学,2022,50(16):54-59. [21] 潘建林,林海.河蟹绿色高效养殖技术与实例[M].北京:中国农业出版社,2021:56-58. [22] 陈星,高子厚.DNA分子标记技术的研究与应用[J].分子植物育种,2019,17(6):1970-1977.