|
|
|
| 硬骨鱼类性别分化过程的表观遗传机制研究进展 |
| 姜洁明1,2, 刘鹰1,2,3, 刘奇1,2, 闫红伟1,2 |
1.大连海洋大学,辽宁 大连 116023;
2.设施渔业教育部重点实验室,辽宁 大连 116023;
3.青岛海洋科学与技术试点国家实验室,山东 青岛 266237 |
|
| Advances on Epigenetic Mechanism of Sex Differentiation in Teleost Fish |
| JIANG Jieming1,2, LIU Ying1,2,3, LIU Qi1,2, YAN Hongwei1,2 |
1. Dalian Ocean University, Dalian, 116023, China;
2. Key Laboratory of Environment Controlled Aquaculture, Ministry of Education, Dalian 116023, China;
3. Pilot National Laboratory for Marine Science and Technology, Qingdao 266237, China |
| 引用本文: |
姜洁明, 刘鹰, 刘奇, 闫红伟. 硬骨鱼类性别分化过程的表观遗传机制研究进展[J]. 水产科学, 2023, 42(4): 726-734.
JIANG Jieming, LIU Ying, LIU Qi, YAN Hongwei. Advances on Epigenetic Mechanism of Sex Differentiation in Teleost Fish. 水产科学, 2023, 42(4): 726-734.
|
|
|
|
| 链接本文: |
| http://www.shchkx.com/CN/10.16378/j.cnki.1003-1111.22010 或 http://www.shchkx.com/CN/Y2023/V42/I4/726 |
[1]梅洁,桂建芳.鱼类性别异形和性别决定的遗传基础及其生物技术操控[J].中国科学:生命科学,2014,44(12):1198-1212.
[2]王德寿,吴天利,张耀光.鱼类性别决定及其机制的研究进展[J].西南师范大学学报(自然科学版),2000,25(3):296-304.
[3]WANG P P. Sex-biased miRNAs of yellow catfish (Pelteobagrus fulvidraco) and their potential role in reproductive development[J].Aquaculture,2018,485:73-80.
[4]CONTE M A, GAMMERDINGER W J, BARTIE K L, et al. A high quality assembly of the Nile Tilapia (Oreochromis niloticus) genome reveals the structure of two sex determination regions[J].BMC Genomics,2017,18(1):341.
[5]姜龙,王忠卫,周莉,等.乌鳢一个养殖群体中性别连锁AFLP标记的筛选[J].水生生物学报,2013,37(6):1174-1178.
[6]ZHAI G, SHU T T, CHEN K X, et al. Successful production of an all-female common carp (Cyprinus carpio L.) population using cyp17a1-deficient neomale carp[J].Engineering,2022,8:181-189.
[7]ZOU C C. Characteristics and sex dimorphism of 17β-hydroxysteroid dehydrogenase family genes in the olive flounder Paralichthys olivaceus[J].The Journal of Steroid Biochemistry and Molecular Biology,2020,199:105597.
[8]RIVERA P, GALLARDO J, ARANEDA C, et al. Sexual maturation in farmed Atlantic salmon (Salmo salar):a review[G]//LU Q. Salmon Aquaculture.London: IntechOpen,2022:1-11.
[9]PALAIOKOSTAS C, BEKAERT M, TAGGART J B, et al. A new SNP-based vision of the genetics of sex determination in European Sea bass (Dicentrarchus labrax)[J].Genetics, Selection, Evolution: GSE,2015,47(1):68.
[10]WANG Q, LIU K Q, FENG B, et al. Transcriptome of gonads from high temperature induced sex reversal during sex determination and differentiation in Chinese tongue sole, Cynoglossus semilaevis[J].Frontiers in Genetics,2019,10:1128.
[11]姜洁明,沈旭芳,刘鹰,等.红鳍东方鲀幼鱼中性别分化相关基因的表达分析[J].水产科学,2022,41(3):362-369.
[12]杨洁,吴宏达,范兆廷.鱼类性别决定机制的研究进展[J].渔业经济研究,2007(3):14-19.
[13]PAVLIDIS M, KOUMOUNDOUROS G, STERIOTI A, et al. Evidence of temperature-dependent sex determination in the European Sea bass (Dicentrarchus labrax L.)[J].Journal of Experimental Zoology,2000,287(3):225-232.
[14]周贺,李佳奇,马海艳,等.低温诱导红鳍东方鲀雄性化及性腺分化的组织学观察[J].大连海洋大学学报,2015,30(1):41-47.
[15]杨震飞,刘波,戈贤平,等.水产养殖环境胁迫对鱼类表观遗传的影响研究进展[J].大连海洋大学学报,2018,33(2):270-282.
[16]任衍钢,白冠军,宋玉奇,等.表观遗传学的起源与发展[J].生物学通报,2016,51(3):57-61.
[17]沈圣,屈彦纯,张军.下一代测序技术在表观遗传学研究中的重要应用及进展[J].遗传,2014,36(3):256-275.
[18]毛媛,杜芳腾,杜瑶,等.表观遗传修饰在调控寿命中的作用[J].生命的化学,2013,33(6):648-652.
[19]STRAHL B D, ALLIS C D. The language of covalent histone modifications[J].Nature,2000,403(6765):41-45.
[20]朱锋,王旭,刘倩莹,等.表观遗传学及其研究方法[J].现代生物医学进展,2017,17(12):2371-2376.
[21]FIRMINO J, CARBALLO C, ARMESTO P, et al. Phylogeny, expression patterns and regulation of DNA Methyltransferases in early development of the flatfish, Solea senegalensis[J].BMC Developmental Biology,2017,17(1):11.
[22]NELISSEN E C M, VAN MONTFOORT A P A, DUMOULIN J C M, et al. Epigenetics and the placenta[J].Human Reproduction Update,2010,17(3):397-417.
[23]SIMPSON E R, MAHENDROO M S, MEANS G D, et al. Aromatase cytochrome P450, the enzyme responsible for estrogen biosynthesis[J].Endocrine Reviews,1994,15(3):342-355.
[24]ZHANG Y, ZHANG S, LU H J, et al. Genes encoding aromatases in teleosts:evolution and expression regulation[J].General and Comparative Endocrinology,2014,205:151-158.
[25]李永婧,吴利敏,李学军.硬骨鱼类性别决定与分化相关基因研究进展[J].河南师范大学学报(自然科学版),2017,45(4):72-78.
[26]TAO W J, YUAN J, ZHOU L Y, et al. Characterization of gonadal transcriptomes from Nile tilapia (Oreochromis niloticus) reveals differentially expressed genes[J].PLoS One,2013,8(5):e63604.
[27]GUIGUEN Y, JALABERT B, THOUARD E, et al. Changes in plasma and gonadal steroid hormones in relation to the reproductive cycle and the sex inversion process in the protandrous seabass, Lates calcarifer[J].General and Comparative Endocrinology,1993,92(3):327-338.
[28]GUIGUEN Y, BAROILLER J F, RICORDEL M J, et al. Involvement of estrogens in the process of sex differentiation in two fish species:the rainbow trout (Oncorhynchus mykiss) and a tilapia (Oreochromis niloticus)[J].Molecular Reproduction and Development,1999,54(2):154-162.
[29]CHANG C F, LEE M F, CHEN G R. Estradiol-17β associated with the sex reversal in protandrous black porgy, Acanthopagrus schlegeli[J].Journal of Experimental Zoology,1994,268(1):53-58.
[30]PIFERRER F, ZANUY S, CARRILLO M, et al. Brief treatment with an aromatase inhibitor during sex differentiation causes chromosomally female salmon to develop as normal, functional males[J].Journal of Experimental Zoology,1994,270(3):255-262.
[31]PIFERRER F. Endocrine sex control strategies for the feminization of teleost fish[J].Aquaculture,2001,197(1/2/3/4):229-281.
[32]TSAI Y J, LEE M F, CHEN C Y, et al. Development of gonadal tissue and aromatase function in the protogynous orange-spotted grouper Epinephelus coioides[J].Zoological Studies,2011,50(6):693-704.
[33]MURATA R, KOBAYASHI Y, KARIMATA H, et al. Transient sex change in the immature Malabar grouper, Epinephelus malabaricus, androgen treatment[J].Biology of Reproduction,2014,91(1):25.
[34]NAVARRO-MARTíN L, VIÑAS J, RIBAS L, et al. DNA methylation of the gonadal aromatase (cyp19a) promoter is involved in temperature-dependent sex ratio shifts in the European Sea bass[J].PLoS Genetics,2011,7(12):e1002447.
[35]PIFERRER F. Epigenetics of sex determination and differentiation in fish[M]// WANG H P, PIFERRER F, CHEN S L, et al. Sex Control in Aquaculture. Chichester: John Wiley & Sons, Ltd,2018:65-83.
[36]CHEN X W, WANG Z P, TANG S J, et al. Genome-wide mapping of DNA methylation in Nile Tilapia[J].Hydrobiologia,2017,791(1):247-257.
[37]CUI Z K, LIU Y, WANG W W, et al. Genome editing reveals dmrt1 as an essential male sex-determining gene in Chinese tongue sole (Cynoglossus semilaevis)[J].Scientific Reports,2017,7:42213.
[38]CHEN S L, ZHANG G J, SHAO C W, et al. Whole-genome sequence of a flatfish provides insights into ZW sex chromosome evolution and adaptation to a benthic lifestyle[J].Nature Genetics,2014,46(3):253-260.
[39]SHAO C W, LI Q Y, CHEN S L, et al. Epigenetic modification and inheritance in sexual reversal of fish[J].Genome Research,2014,24(4):604-615.
[40]WEN A Y, YOU F, SUN P, et al. CpG methylation of dmrt1 and cyp19a promoters in relation to their sexual dimorphic expression in the Japanese flounder Paralichthys olivaceus[J].Journal of Fish Biology,2014,84(1):193-205.
[41]SI Y F. DNA methylation level of cyp19a1a and Foxl2 gene related to their expression patterns and reproduction traits during ovary development stages of Japanese flounder (Paralichthys olivaceus)[J].Gene,2016,575(2):321-330.
[42]ZHOU H, ZHUANG Z X, SUN Y Q, et al. Changes in DNA methylation during epigenetic-associated sex reversal under low temperature in Takifugu rubripes[J].PLoS One,2019,14(8):e0221641.
[43]ZHANG Y, ZHANG S, LIU Z X, et al. Epigenetic modifications during sex change repress gonadotropin stimulation of Cyp19a1a in a teleost ricefield eel (Monopterus albus)[J].Endocrinology,2013,154(8):2881-2890.
[44]WU G C, LI H W, HUANG C H, et al. The testis is a primary factor that contributes to epigenetic modifications in the ovaries of the protandrous black porgy, Acanthopagrus schlegelii[J].Biology of Reproduction,2016,94(6):132.
[45]LI M H, SUN L N, WANG D S, et al. Roles of estrogens in fish sexual plasticity and sex differentiation[J].General and Comparative Endocrinology,2019,277:9-16.
[46]朱叶飞.青鳉性腺及脑miRNA鉴定[D].上海:上海海洋大学,2016.
[47]徐源,孙铁成,张爱玲,等.卵巢miRNA研究进展[J].畜牧兽医学报,2014,45(4):509-516.
[48]LEE R C, FEINBAUM R L, AMBROS V, et al. The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14[J].Cell,1993,75(5):843-854.
[49]KOZOMARA A, BIRGAOANU M, GRIFFITHS-JONES S. miRBase:from microRNA sequences to function[J].Nucleic Acids Research,2018,47(D1):D155-D162.
[50]REAL F M, SEKIDO R, LUPIÁÑEZ D G, et al. A microRNA (mmu-miR-124) prevents Sox9 expression in developing mouse ovarian cells[J].Biology of Reproduction,2013,89(4):78.
[51]MIAO N. Identification of male-biased microRNA-107 as a direct regulator for nuclear receptor subfamily 5 group A member 1 based on sexually dimorphic microRNA expression profiling from chicken embryonic gonads[J].Molecular and Cellular Endocrinology,2016,429:29-40.
[52]PENG W, YU S N, HANDLER A M, et al. miRNA-1-3p is an early embryonic male sex-determining factor in the Oriental fruit fly Bactrocera dorsalis[J].Nature Communications,2020,11:932.
[53]PASQUINELLI A E, REINHART B J, SLACK F, et al. Conservation of the sequence and temporal expression of let-7 heterochronic regulatory RNA[J].Nature,2000,408(6808):86-89.
[54]李文笙,王东方.鱼类microRNA研究进展[J].水产学报,2017,41(4):628-639.
[55]BIZUAYEHU T T, BABIAK J, NORBERG B, et al. Sex-biased miRNA expression in Atlantic halibut (Hippoglossus hippoglossus) brain and gonads[J].Sexual Development,2012,6(5):257-266.
[56]LAU K, LAI K P, BAO J Y J, et al. Identification and expression profiling of microRNAs in the brain, liver and gonads of marine medaka (Oryzias melastigma) and in response to hypoxia[J].PLoS One,2014,9(10):e110698.
[57]XIAO J, ZHONG H, ZHOU Y, et al. Identification and characterization of microRNAs in ovary and testis of Nile Tilapia (Oreochromis niloticus) by using solexa sequencing technology[J].PLoS One,2014,9(1):e86821.
[58]WANG F, JIA Y F, WANG P, et al. Identification and profiling of Cyprinus carpio microRNAs during ovary differentiation by deep sequencing[J].BMC Genomics,2017,18(1):333.
[59]TAO W J, SUN L N, SHI H J, et al. Integrated analysis of miRNA and mRNA expression profiles in tilapia gonads at an early stage of sex differentiation[J].BMC Genomics,2016,17:328.
[60]WANG C L, WANG Z P, WANG J Q, et al. Identification of candidate piRNAs in the gonads of Paralichthys olivaceus (Japanese flounder)[J].Zoological Research,2016,37(5):301-306.
[61]WANG W WU. Coordinated microRNA and messenger RNA expression profiles for understanding sexual dimorphism of gonads and the potential roles of microRNA in the steroidogenesis pathway in Nile tilapia (Oreochromis niloticus)[J].Theriogenology,2016,85(5):970-978.
[62]YU Q, PENG C, YE Z F, et al. An estradiol-17β/miRNA-26a/cyp19a1a regulatory feedback loop in the protogynous hermaphroditic fish, Epinephelus coioi-des[J].Molecular and Cellular Endocrinology,2020,504:110689.
[63]YAN H W, LIU Q, JIANG J M, et al. Identification of sex differentiation-related microRNA and long non-coding RNA in Takifugu rubripes gonads[J].Scien-tific Reports,2021,11:7459.
[64]JING J, WU J J, LIU W, et al. Sex-biased miRNAs in gonad and their potential roles for testis development in yellow catfish[J].PLoS One,2014,9(9):e107946.
[65]WONGWARANGKANA C, FUJIMORI K E, AKIBA M, et al. Deep sequencing, profiling and detailed annotation of microRNAs in Takifugu rubripes[J].BMC Genomics,2015,16(1):457.
[66]VAZ C, WEE C W, LEE G P S, et al. Deep sequencing of small RNA facilitates tissue and sex associated microRNA discovery in zebrafish[J].BMC Genomics,2015,16:950.
[67]PRESSLAUER C, TILAHUN BIZUAYEHU T, KOPP M, et al. Dynamics of miRNA transcriptome during gonadal development of zebrafish[J].Scientific Reports,2017,7:43850.
[68]ZHANG X J. Identification and differential expression of microRNAs in testis and ovary of Amur sturgeon (Acipenser schrenckii)[J].Gene,2018,658:36-46.
[69]SUN Z P, HAO T, TIAN J Z. Identification of exosomes and its signature miRNAs of male and female Cynoglossus semilaevis[J].Scientific Reports,2017,7:860.
[70]ZHAO C, ZHANG G S, YIN S W, et al. Integrated analysis of mRNA-seq and miRNA-seq reveals the potential roles of sex-biased miRNA-mRNA pairs in gonad tissue of dark sleeper (Odontobutis potamophila)[J].BMC Genomics,2017,18(1):613.
[71]DU X X. Discovery and functional characterization of microRNAs and their potential roles for gonadal development in spotted knifejaw, Oplegnathus punctatus[J].Comparative Biochemistry and Physiology Part D:Genomics and Proteomics,2018,28:1-8.
[72]HE P P. Identification and characterization of microRNAs in the gonad of Trachinotus ovatus using Solexa sequencing[J].Comparative Biochemistry and Physiology Part D:Genomics and Proteomics,2019,30:312-320.
[73]DESVIGNES T, BATZEL P, SYDES J, et al. MiRNA analysis with Prost! Reveals evolutionary conservation of organ-enriched expression and post-transcriptional modifications in three-spined stickleback and zebrafish[J].Scientific Reports,2019,9:3913.
[74]LI S Z, LIN G M, FANG W Y, et al. Identification and comparison of microRNAs in the gonad of the yellowfin seabream (Acanthopagrus latus)[J].International Journal of Molecular Sciences,2020,21(16):5690.
[75]FU Y S, XU Z, WEN B, et al. Gonad-specific transcriptomes reveal differential expression of gene and miRNA between male and female of the Discus fish (Symphysodon aequifasciatus)[J].Frontiers in Physiology,2020,11:754.
[76]BROWN C J, HENDRICH B D, RUPERT J L, et al. The human XIST gene:analysis of a 17 kb inactive X-specific RNA that contains conserved repeats and is highly localized within the nucleus[J].Cell,1992,71(3):527-542.
[77]王伟佳,韩兆方,李完波,等.大黄鱼雌雄性腺长链非编码RNA的挖掘与差异分析[J].中国水产科学,2019,26(5):852-860.
[78]宋飞彪,俞贞贞,董在杰,等.lncRNA在水产动物中的研究进展[J].水产学报,2020,44(8):1371-1383.
[79]MCHUGH C A, CHEN C K, CHOW A, et al. The Xist lncRNA interacts directly with SHARP to silence transcription through HDAC3[J].Nature,2015,521(7551):232-236.
[80]MULVEY B B. An interactive network of long non-coding RNAs facilitates the Drosophila sex determination decision[J].Biochimica et Biophysica Acta (BBA)-Gene Regulatory Mechanisms,2014,1839(9):773-784.
[81]ZHANG L. A novel ncRNA gene from mouse chromosome 5 trans-splices with Dmrt1 on chromosome 19[J].Biochemical and Biophysical Research Communications,2010,400(4):696-700.
[82]ZHANG J, YU P, ZHOU Q Y, et al. Screening and characterisation of sex differentiation-related long non-coding RNAs in Chinese soft-shell turtle (Pelodiscus sinensis)[J].Scientific Reports,2018,8:8630.
[83]彭锟,宋凌云,乔栖梧,等.尼罗罗非鱼雌性性腺关键LncRNA的鉴定和表达分析[J].西南师范大学学报(自然科学版),2019,44(6):40-45.
[84]CAI J. Effects of long term antiprogestine mifepristone (RU486) exposure on sexually dimorphic lncRNA expression and gonadal masculinization in Nile tilapia (Oreochromis niloticus)[J].Aquatic Toxicology,2019,215:105289.
[85]SHEN Y D, GUO X W, WANG W M. Identification and characterization of circular RNAs in zebrafish[J].FEBS Letters,2017,591(1):213-220.
[86]ORTEGA-RECALDE O, GOIKOETXEA A, HORE T A, et al. The genetics and epigenetics of sex change in fish[J].Annual Review of Animal Biosciences,2020,8:47-69.
[87]王维,孟智启,石放雄.组蛋白修饰及其生物学效应[J].遗传,2012,34(7):19-27.
[88]DíAZ N, PIFERRER F. Lasting effects of early exposure to temperature on the gonadal transcriptome at the time of sex differentiation in the European Sea bass, a fish with mixed genetic and environmental sex determination[J].BMC Genomics,2015,16(1):679.
[89]LAI F L, CHENG Y B, ZOU J, et al. Identification of histone modifications reveals a role of H2b monoubiquitination in transcriptional regulation of dmrt1 in Monopterus albus[J].International Journal of Biological Sciences,2021,17(8):2009-2020. |
| [1] |
颜研, 李旭东, 裴超, 孔祥会. 鱼类铁调素生物学功能与体外表达的研究进展[J]. 水产科学, 2023, 42(5): 901-910. |
| [2] |
刘红艳, 熊飞, 翟东东, 王莹, 夏明, 陈元元. 鲿科鱼类DNA条形码鉴定及系统进化研究[J]. 水产科学, 2023, 42(4): 575-584. |
| [3] |
丁祝进, 崔虎军, 谷昭天, 赵晓恒, 程汉良. 鱼类巨噬细胞标记物的研究进展[J]. 水产科学, 2023, 42(3): 517-526. |
| [4] |
刘修泽, 吉光, 王彬, 段妍, 王小林, 王爱勇, 柴雨, 孙明, 郭栋, 董婧, 王源元, 田杨. 大连海域5种经济鱼类的生长、死亡及资源合理利用研究[J]. 水产科学, 2023, 42(1): 73-80. |
| [5] |
唐晟凯, 刘燕山, 王华, 李大命, 张彤晴, 孙晶莹, 许飞, 王志浩. 环境DNA技术在邵伯湖鱼类资源监测中的应用[J]. 水产科学, 2022, 41(6): 1007-1016. |
| [6] |
姜洁明, 沈旭芳, 刘鹰, 张琦, 周慧婷, 王佳, 闫红伟, 王辰奇, 刘奇. 红鳍东方鲀幼鱼中性别分化相关基因的表达分析[J]. 水产科学, 2022, 41(3): 362-369. |
| [7] |
田源, 吴耀, 祝国荣, 赵高志, 林茜, 姚德政, 彭俊杰. 淡水养殖中水生植物对水产鱼类的作用研究进展[J]. 水产科学, 2022, 41(2): 336-342. |
| [8] |
张宇柔, 陈玉珂, 于梦楠, 雷新雨, 王嘉婧, 高永生, 王秋举, MAHMOUD M. Elsadek, 张东鸣. 益生芽孢杆菌对鱼类生长与抗病力影响的研究进展[J]. 水产科学, 2022, 41(2): 325-335. |
| [9] |
韩军军, 陈朋, 祁峰, 封永辉, 阿地力, 胡江伟, 张钰, 蔡林钢, 张人铭. 新疆渭干河流域鱼类资源现状[J]. 水产科学, 2022, 41(1): 92-101. |
| [10] |
罗智文, 董志祥, 林连兵, 张棋麟. 鱼类重要免疫器官抗菌机制的研究进展[J]. 水产科学, 2021, 40(4): 624-634. |
| [11] |
党莹超, 戴小杰, 吴峰. 淀山湖鱼类群落结构季节性变化分析[J]. 水产科学, 2021, 40(3): 361-368. |
| [12] |
陈一竹, 杨长幸, 马文文, 王月, 冯梦霞, 董文广, 汪曦, 张曼, 董静, 高云霓, 顾钱洪, 周传江. 鱼类逆境情况下MicroRNA表达研究进展[J]. 水产科学, 2020, 39(5): 771-779. |
| [13] |
陈军平, 胡玉洁, 王磊, 田雪, 李学军. 鱼类遗传连锁图谱构建及QTL定位的研究进展[J]. 水产科学, 2020, 39(4): 620-630. |
| [14] |
吴倩, 李潮, 高天扬, 李炜, 张雯君, 王俊杰, 赵俊. 流溪河保护区鱼类群落结构及其时空变动[J]. 水产科学, 2020, 39(2): 234-244. |
| [15] |
李艳菲, 狄桂兰, 王宁, 裴超, 孔祥会. 鱼类黏液细胞研究进展[J]. 水产科学, 2020, 39(1): 143-150. |
|
|
|
|
2023, Vol. 42 
